IL_4U1V_363

3D structure

PDB id

4U1V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AAUUC*GUUAU

Length

10 nucleotides

Bulged bases

4U1V|1|BA|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4U1V_363 not in the Motif Atlas

Homologous match to IL_5J7L_399

Geometric discrepancy: 0.0921

The information below is about IL_5J7L_399

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_96236.1

Basepair signature

cWW-tWW-cWW-L-cWW

Number of instances in this motif group

1

Unit IDs

4U1V|1|BA|A|844
4U1V|1|BA|A|845
4U1V|1|BA|U|846
4U1V|1|BA|U|847
4U1V|1|BA|C|848
*
4U1V|1|BA|G|930
4U1V|1|BA|U|931
4U1V|1|BA|U|932
4U1V|1|BA|A|933
4U1V|1|BA|U|934

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BZ

50S ribosomal protein L30