IL_4U20_337
3D structure
- PDB id
- 4U20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to flopristin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AUAC*GUGUUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U20_337 not in the Motif Atlas
- Geometric match to IL_8P9A_467
- Geometric discrepancy: 0.3419
- The information below is about IL_8P9A_467
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_07469.3
- Basepair signature
- cWW-tSH-cWW-cSH-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
4U20|1|DA|A|2459
4U20|1|DA|U|2460
4U20|1|DA|A|2461
4U20|1|DA|C|2462
*
4U20|1|DA|G|2488
4U20|1|DA|U|2489
4U20|1|DA|G|2490
4U20|1|DA|U|2491
4U20|1|DA|U|2492
4U20|1|DA|U|2493
Current chains
- Chain DA
- 23S rRNA
Nearby chains
- Chain DM
- 50S ribosomal protein L16
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