IL_4U20_349

3D structure

PDB id

4U20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to flopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

AGAUAAG*CGAAACU

Length

14 nucleotides

Bulged bases

4U20|1|DA|A|2765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U20|1|DA|A|2736
4U20|1|DA|G|2737
4U20|1|DA|A|2738
4U20|1|DA|U|2739
4U20|1|DA|A|2740
4U20|1|DA|A|2741
4U20|1|DA|G|2742
*
4U20|1|DA|C|2762
4U20|1|DA|G|2763
4U20|1|DA|A|2764
4U20|1|DA|A|2765
4U20|1|DA|A|2766
4U20|1|DA|C|2767
4U20|1|DA|U|2768

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D4

50S ribosomal protein L36

Chain DG

50S ribosomal protein L6

Chain DJ

50S ribosomal protein L13