IL_4U20_375

3D structure

PDB id

4U20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to flopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

AGAAG*CGGACCU

Length

12 nucleotides

Bulged bases

4U20|1|CA|A|1257, 4U20|1|CA|A|1280, 4U20|1|CA|C|1281

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U20|1|CA|A|1254
4U20|1|CA|G|1255
4U20|1|CA|A|1256
4U20|1|CA|A|1257
4U20|1|CA|G|1258
*
4U20|1|CA|C|1277
4U20|1|CA|G|1278
4U20|1|CA|G|1279
4U20|1|CA|A|1280
4U20|1|CA|C|1281
4U20|1|CA|C|1282
4U20|1|CA|U|1283

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CC

30S ribosomal protein S3

Chain CJ

30S ribosomal protein S10

Chain CN

30S ribosomal protein S14