IL_4U20_380

3D structure

PDB id

4U20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to flopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGGCAAG*CAACCCG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U20|1|DA|C|873
4U20|1|DA|G|874
4U20|1|DA|G|875
4U20|1|DA|C|876
4U20|1|DA|A|877
4U20|1|DA|A|878
4U20|1|DA|G|879
*
4U20|1|DA|C|898
4U20|1|DA|A|899
4U20|1|DA|A|900
4U20|1|DA|C|901
4U20|1|DA|C|902
4U20|1|DA|C|903
4U20|1|DA|G|904

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DB

5S ribosomal RNA; 5S rRNA

Chain DM

50S ribosomal protein L16