IL_4U24_223

3D structure

PDB id

4U24 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to dalfopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUGCC*GGAGGAAG

Length

13 nucleotides

Bulged bases

4U24|1|CA|U|1159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U24|1|CA|C|1158
4U24|1|CA|U|1159
4U24|1|CA|G|1160
4U24|1|CA|C|1161
4U24|1|CA|C|1162
*
4U24|1|CA|G|1174
4U24|1|CA|G|1175
4U24|1|CA|A|1176
4U24|1|CA|G|1177
4U24|1|CA|G|1178
4U24|1|CA|A|1179
4U24|1|CA|A|1180
4U24|1|CA|G|1181

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CB

30S ribosomal protein S2

Chain CG

30S ribosomal protein S7

Chain CI

30S ribosomal protein S9