IL_4U24_367

3D structure

PDB id

4U24 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to dalfopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGAAGUUU*GAAUGUGCCUUCGGGAACC

Length

27 nucleotides

Bulged bases

4U24|1|CA|U|1029, 4U24|1|CA|U|1030, 4U24|1|CA|C|1031, 4U24|1|CA|G|1032

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U24|1|CA|G|1002
4U24|1|CA|G|1003
4U24|1|CA|A|1004
4U24|1|CA|A|1005
4U24|1|CA|G|1006
4U24|1|CA|U|1007
4U24|1|CA|U|1008
4U24|1|CA|U|1009
*
4U24|1|CA|G|1020
4U24|1|CA|A|1021
4U24|1|CA|A|1022
4U24|1|CA|U|1023
4U24|1|CA|G|1024
4U24|1|CA|U|1025
4U24|1|CA|G|1026
4U24|1|CA|C|1027
4U24|1|CA|C|1028
4U24|1|CA|U|1029
4U24|1|CA|U|1030
4U24|1|CA|C|1031
4U24|1|CA|G|1032
4U24|1|CA|G|1033
4U24|1|CA|G|1034
4U24|1|CA|A|1035
4U24|1|CA|A|1036
4U24|1|CA|C|1037
4U24|1|CA|C|1038

Current chains

Chain CA

16S rRNA

Nearby chains

Chain AG

30S ribosomal protein S7

Chain CN

30S ribosomal protein S14