IL_4U25_297
3D structure
- PDB id
- 4U25 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to virginiamycin M1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AGAGAAC*GACU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4U25|1|DA|A|1650
4U25|1|DA|G|1651
4U25|1|DA|A|1652
4U25|1|DA|G|1653
4U25|1|DA|A|1654
4U25|1|DA|A|1655
4U25|1|DA|C|1656
*
4U25|1|DA|G|2004
4U25|1|DA|A|2005
4U25|1|DA|C|2006
4U25|1|DA|U|2007
Current chains
- Chain DA
- 23S rRNA
Nearby chains
- Chain DD
- 50S ribosomal protein L3
- Chain DN
- 50S ribosomal protein L17
Coloring options: