IL_4U26_218

3D structure

PDB id

4U26 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GAAGUUU*GAAUGUGCCUUCGGGAAC

Length

25 nucleotides

Bulged bases

4U26|1|CA|U|1030, 4U26|1|CA|G|1032

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U26|1|CA|G|1003
4U26|1|CA|A|1004
4U26|1|CA|A|1005
4U26|1|CA|G|1006
4U26|1|CA|U|1007
4U26|1|CA|U|1008
4U26|1|CA|U|1009
*
4U26|1|CA|G|1020
4U26|1|CA|A|1021
4U26|1|CA|A|1022
4U26|1|CA|U|1023
4U26|1|CA|G|1024
4U26|1|CA|U|1025
4U26|1|CA|G|1026
4U26|1|CA|C|1027
4U26|1|CA|C|1028
4U26|1|CA|U|1029
4U26|1|CA|U|1030
4U26|1|CA|C|1031
4U26|1|CA|G|1032
4U26|1|CA|G|1033
4U26|1|CA|G|1034
4U26|1|CA|A|1035
4U26|1|CA|A|1036
4U26|1|CA|C|1037

Current chains

Chain CA

16S rRNA

Nearby chains

Chain AG

30S ribosomal protein S7

Chain CN

30S ribosomal protein S14