IL_4U26_366

3D structure

PDB id

4U26 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UUUAAUUCGAUGCAACGCGAAGAACCUUAC*GGCUA

Length

35 nucleotides

Bulged bases

4U26|1|CA|G|971, 4U26|1|CA|A|975, 4U26|1|CA|G|976, 4U26|1|CA|A|978

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U26|1|CA|U|955
4U26|1|CA|U|956
4U26|1|CA|U|957
4U26|1|CA|A|958
4U26|1|CA|A|959
4U26|1|CA|U|960
4U26|1|CA|U|961
4U26|1|CA|C|962
4U26|1|CA|G|963
4U26|1|CA|A|964
4U26|1|CA|U|965
4U26|1|CA|G|966
4U26|1|CA|C|967
4U26|1|CA|A|968
4U26|1|CA|A|969
4U26|1|CA|C|970
4U26|1|CA|G|971
4U26|1|CA|C|972
4U26|1|CA|G|973
4U26|1|CA|A|974
4U26|1|CA|A|975
4U26|1|CA|G|976
4U26|1|CA|A|977
4U26|1|CA|A|978
4U26|1|CA|C|979
4U26|1|CA|C|980
4U26|1|CA|U|981
4U26|1|CA|U|982
4U26|1|CA|A|983
4U26|1|CA|C|984
*
4U26|1|CA|G|1221
4U26|1|CA|G|1222
4U26|1|CA|C|1223
4U26|1|CA|U|1224
4U26|1|CA|A|1225

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CI

30S ribosomal protein S9

Chain CJ

30S ribosomal protein S10

Chain CM

30S ribosomal protein S13

Chain CN

30S ribosomal protein S14

Chain CS

30S ribosomal protein S19