IL_4U26_375
3D structure
- PDB id
- 4U26 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GAAC*GAGUGAAAAAGAAC
- Length
- 18 nucleotides
- Bulged bases
- 4U26|1|DA|A|504, 4U26|1|DA|A|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U26_375 not in the Motif Atlas
- Geometric match to IL_5J7L_255
- Geometric discrepancy: 0.1353
- The information below is about IL_5J7L_255
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_81516.2
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 6
Unit IDs
4U26|1|DA|G|481
4U26|1|DA|A|482
4U26|1|DA|A|483
4U26|1|DA|C|484
*
4U26|1|DA|G|496
4U26|1|DA|A|497
4U26|1|DA|G|498
4U26|1|DA|U|499
4U26|1|DA|G|500
4U26|1|DA|A|501
4U26|1|DA|A|502
4U26|1|DA|A|503
4U26|1|DA|A|504
4U26|1|DA|A|505
4U26|1|DA|G|506
4U26|1|DA|A|507
4U26|1|DA|A|508
4U26|1|DA|C|509
Current chains
- Chain DA
- 23S rRNA
Nearby chains
- Chain DS
- 50S ribosomal protein L22
- Chain DU
- 50S ribosomal protein L24
Coloring options: