IL_4U27_385

3D structure

PDB id

4U27 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to flopristin and linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAG*CUCAC

Length

42 nucleotides

Bulged bases

4U27|1|DA|U|1065

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U27|1|DA|G|1055
4U27|1|DA|G|1056
4U27|1|DA|A|1057
4U27|1|DA|U|1058
4U27|1|DA|G|1059
4U27|1|DA|U|1060
4U27|1|DA|U|1061
4U27|1|DA|G|1062
4U27|1|DA|G|1063
4U27|1|DA|C|1064
4U27|1|DA|U|1065
4U27|1|DA|U|1066
4U27|1|DA|A|1067
4U27|1|DA|G|1068
4U27|1|DA|A|1069
4U27|1|DA|A|1070
4U27|1|DA|G|1071
4U27|1|DA|C|1072
4U27|1|DA|A|1073
4U27|1|DA|G|1074
4U27|1|DA|C|1075
4U27|1|DA|C|1076
4U27|1|DA|A|1077
4U27|1|DA|U|1078
4U27|1|DA|C|1079
4U27|1|DA|A|1080
4U27|1|DA|U|1081
4U27|1|DA|U|1082
4U27|1|DA|U|1083
4U27|1|DA|A|1084
4U27|1|DA|A|1085
4U27|1|DA|A|1086
4U27|1|DA|G|1087
4U27|1|DA|A|1088
4U27|1|DA|A|1089
4U27|1|DA|A|1090
4U27|1|DA|G|1091
*
4U27|1|DA|C|1100
4U27|1|DA|U|1101
4U27|1|DA|C|1102
4U27|1|DA|A|1103
4U27|1|DA|C|1104

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D4

50S ribosomal protein L36

Chain DI

50S ribosomal protein L11