IL_4U27_390

3D structure

PDB id

4U27 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to flopristin and linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGAGGCUUUGAAG*UGGAGCCGACCUUGAAAUAC

Length

33 nucleotides

Bulged bases

4U27|1|DA|U|2132, 4U27|1|DA|A|2163, 4U27|1|DA|C|2164, 4U27|1|DA|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U27|1|DA|G|2124
4U27|1|DA|G|2125
4U27|1|DA|A|2126
4U27|1|DA|G|2127
4U27|1|DA|G|2128
4U27|1|DA|C|2129
4U27|1|DA|U|2130
4U27|1|DA|U|2131
4U27|1|DA|U|2132
4U27|1|DA|G|2133
4U27|1|DA|A|2134
4U27|1|DA|A|2135
4U27|1|DA|G|2136
*
4U27|1|DA|U|2155
4U27|1|DA|G|2156
4U27|1|DA|G|2157
4U27|1|DA|A|2158
4U27|1|DA|G|2159
4U27|1|DA|C|2160
4U27|1|DA|C|2161
4U27|1|DA|G|2162
4U27|1|DA|A|2163
4U27|1|DA|C|2164
4U27|1|DA|C|2165
4U27|1|DA|U|2166
4U27|1|DA|U|2167
4U27|1|DA|G|2168
4U27|1|DA|A|2169
4U27|1|DA|A|2170
4U27|1|DA|A|2171
4U27|1|DA|U|2172
4U27|1|DA|A|2173
4U27|1|DA|C|2174

Current chains

Chain DA

23S rRNA

Nearby chains