IL_4U27_398

3D structure

PDB id

4U27 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to flopristin and linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GAAGUUU*GAAUGUGCCUUCGGGAAC

Length

25 nucleotides

Bulged bases

4U27|1|CA|U|1029, 4U27|1|CA|U|1030, 4U27|1|CA|C|1031, 4U27|1|CA|G|1032

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U27|1|CA|G|1003
4U27|1|CA|A|1004
4U27|1|CA|A|1005
4U27|1|CA|G|1006
4U27|1|CA|U|1007
4U27|1|CA|U|1008
4U27|1|CA|U|1009
*
4U27|1|CA|G|1020
4U27|1|CA|A|1021
4U27|1|CA|A|1022
4U27|1|CA|U|1023
4U27|1|CA|G|1024
4U27|1|CA|U|1025
4U27|1|CA|G|1026
4U27|1|CA|C|1027
4U27|1|CA|C|1028
4U27|1|CA|U|1029
4U27|1|CA|U|1030
4U27|1|CA|C|1031
4U27|1|CA|G|1032
4U27|1|CA|G|1033
4U27|1|CA|G|1034
4U27|1|CA|A|1035
4U27|1|CA|A|1036
4U27|1|CA|C|1037

Current chains

Chain CA

16S rRNA

Nearby chains

Chain AG

30S ribosomal protein S7

Chain CN

30S ribosomal protein S14