3D structure

PDB id
4U3M (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of Anisomycin bound to the yeast 80S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CC*GUG
Length
5 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4U3M_070 not in the Motif Atlas
Homologous match to IL_8C3A_076
Geometric discrepancy: 0.1365
The information below is about IL_8C3A_076
Detailed Annotation
Single stack bend
Broad Annotation
No text annotation
Motif group
IL_05035.2
Basepair signature
cWW-L-cWW
Number of instances in this motif group
38

Unit IDs

4U3M|1|1|C|1670
4U3M|1|1|C|1671
*
4U3M|1|1|G|1776
4U3M|1|1|U|1777
4U3M|1|1|G|1778

Current chains

Chain 1
25s rRNA

Nearby chains

Chain M9
60S ribosomal protein L19-A
Chain O4
60S ribosomal protein L34-A

Coloring options:


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