IL_4U3M_231
3D structure
- PDB id
- 4U3M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Anisomycin bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGAAU*GAAUUCCGUGAA
- Length
- 17 nucleotides
- Bulged bases
- 4U3M|1|4|C|84, 4U3M|1|4|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U3M_231 not in the Motif Atlas
- Homologous match to IL_5TBW_147
- Geometric discrepancy: 0.0653
- The information below is about IL_5TBW_147
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_39287.1
- Basepair signature
- cWW-L-R-L-tSH-tSS-L-tHS-cWW-L-L
- Number of instances in this motif group
- 1
Unit IDs
4U3M|1|4|U|69
4U3M|1|4|G|70
4U3M|1|4|A|71
4U3M|1|4|A|72
4U3M|1|4|U|73
*
4U3M|1|4|G|78
4U3M|1|4|A|79
4U3M|1|4|A|80
4U3M|1|4|U|81
4U3M|1|4|U|82
4U3M|1|4|C|83
4U3M|1|4|C|84
4U3M|1|4|G|85
4U3M|1|4|U|86
4U3M|1|4|G|87
4U3M|1|4|A|88
4U3M|1|4|A|89
Current chains
- Chain 4
- 5.8s rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain N6
- 60S ribosomal protein L26-A
- Chain O5
- 60S ribosomal protein L35-A
- Chain O7
- 60S ribosomal protein L37-A
- Chain o5
- 60S ribosomal protein L35-A
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