IL_4U3M_286

3D structure

PDB id

4U3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Anisomycin bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUGGC*GAAUC

Length

10 nucleotides

Bulged bases

4U3M|1|5|G|1236

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4U3M_286 not in the Motif Atlas

Homologous match to IL_8C3A_058

Geometric discrepancy: 0.3656

The information below is about IL_8C3A_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_30542.5

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

4U3M|1|5|G|1234
4U3M|1|5|U|1235
4U3M|1|5|G|1236
4U3M|1|5|G|1237
4U3M|1|5|C|1238
*
4U3M|1|5|G|1250
4U3M|1|5|A|1251
4U3M|1|5|A|1252
4U3M|1|5|U|1253
4U3M|1|5|C|1254

Current chains

Chain 5

25s rRNA

Nearby chains

Chain m2

UNKNOWN PROTEIN m2

Chain p0

60S acidic ribosomal protein P0