IL_4U3N_487

3D structure

PDB id

4U3N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GGGC*GUUCU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U3N|1|5|G|171
4U3N|1|5|G|172
4U3N|1|5|G|173
4U3N|1|5|C|174
*
4U3N|1|5|G|244
4U3N|1|5|U|245
4U3N|1|5|U|246
4U3N|1|5|C|247
4U3N|1|5|U|248

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain M3

60S ribosomal protein L13-A

Chain m3

60S ribosomal protein L13-A

Chain o5

60S ribosomal protein L35-A