3D structure

PDB id
4U3U (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of Cycloheximide bound to the yeast 80S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
UUGGGGC*GUUCUUUGUAA
Length
18 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4U3U|1|5|U|168
4U3U|1|5|U|169
4U3U|1|5|G|170
4U3U|1|5|G|171
4U3U|1|5|G|172
4U3U|1|5|G|173
4U3U|1|5|C|174
*
4U3U|1|5|G|244
4U3U|1|5|U|245
4U3U|1|5|U|246
4U3U|1|5|C|247
4U3U|1|5|U|248
4U3U|1|5|U|249
4U3U|1|5|U|250
4U3U|1|5|G|251
4U3U|1|5|U|252
4U3U|1|5|A|253
4U3U|1|5|A|254

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain 1
Large subunit ribosomal RNA; LSU rRNA
Chain M3
60S ribosomal protein L13-A
Chain l8
60S ribosomal protein L8-A
Chain m3
60S ribosomal protein L13-A
Chain o5
60S ribosomal protein L35-A

Coloring options:

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