IL_4U3U_251

3D structure

PDB id

4U3U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Cycloheximide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CAGACAUGGCUGGG*CAUAAUG

Length

21 nucleotides

Bulged bases

4U3U|1|5|U|620

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U3U|1|5|C|435
4U3U|1|5|A|436
4U3U|1|5|G|437
4U3U|1|5|A|438
4U3U|1|5|C|439
4U3U|1|5|A|440
4U3U|1|5|U|441
4U3U|1|5|G|442
4U3U|1|5|G|443
4U3U|1|5|C|491
4U3U|1|5|U|492
4U3U|1|5|G|493
4U3U|1|5|G|494
4U3U|1|5|G|495
*
4U3U|1|5|C|618
4U3U|1|5|A|619
4U3U|1|5|U|620
4U3U|1|5|A|621
4U3U|1|5|A|622
4U3U|1|5|U|623
4U3U|1|5|G|624

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain l6

60S ribosomal protein L6-A

Chain o2

60S ribosomal protein L32

Chain o3

60S ribosomal protein L33-A