IL_4U3U_438
3D structure
- PDB id
- 4U3U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Cycloheximide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AAUAG*CUUCU
- Length
- 10 nucleotides
- Bulged bases
- 4U3U|1|6|A|1346, 4U3U|1|6|U|1347
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U3U_438 not in the Motif Atlas
- Homologous match to IL_8CRE_459
- Geometric discrepancy: 0.2278
- The information below is about IL_8CRE_459
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4U3U|1|6|A|1345
4U3U|1|6|A|1346
4U3U|1|6|U|1347
4U3U|1|6|A|1348
4U3U|1|6|G|1349
*
4U3U|1|6|C|1376
4U3U|1|6|U|1377
4U3U|1|6|U|1378
4U3U|1|6|C|1379
4U3U|1|6|U|1380
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
- Chain c6
- 40S ribosomal protein S16-A
- Chain d0
- 40S ribosomal protein S20
Coloring options: