IL_4U4O_146
3D structure
- PDB id
- 4U4O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Geneticin bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GCC*GUGC
- Length
- 7 nucleotides
- Bulged bases
- 4U4O|1|2|U|280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U4O_146 not in the Motif Atlas
- Geometric match to IL_7RQB_025
- Geometric discrepancy: 0.3541
- The information below is about IL_7RQB_025
- Detailed Annotation
- Intercalated cWW
- Broad Annotation
- Intercalated cWW
- Motif group
- IL_52767.4
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
4U4O|1|2|G|274
4U4O|1|2|C|275
4U4O|1|2|C|276
*
4U4O|1|2|G|279
4U4O|1|2|U|280
4U4O|1|2|G|281
4U4O|1|2|C|282
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain S6
- 40S ribosomal protein S6-A
Coloring options: