IL_4U4O_465
3D structure
- PDB id
- 4U4O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Geneticin bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- CUCUGAAUG*CGCGGG
- Length
- 15 nucleotides
- Bulged bases
- 4U4O|1|1|U|2205, 4U4O|1|1|U|2209
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4U4O|1|1|C|2202
4U4O|1|1|U|2203
4U4O|1|1|C|2204
4U4O|1|1|U|2205
4U4O|1|1|G|2206
4U4O|1|1|A|2207
4U4O|1|1|A|2208
4U4O|1|1|U|2209
4U4O|1|1|G|2210
*
4U4O|1|1|C|2235
4U4O|1|1|G|2236
4U4O|1|1|C|2237
4U4O|1|1|G|2238
4U4O|1|1|G|2239
4U4O|1|1|G|2240
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain L2
- 60S ribosomal protein L2-A
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