IL_4U4R_506

3D structure

PDB id

4U4R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Lactimidomycin bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UU*AGUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U4R|1|5|U|177
4U4R|1|5|U|178
*
4U4R|1|5|A|238
4U4R|1|5|G|239
4U4R|1|5|U|240
4U4R|1|5|G|241

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain m3

60S ribosomal protein L13-A

Chain o5

60S ribosomal protein L35-A

Chain o7

60S ribosomal protein L37-A