IL_4U4U_161

3D structure

PDB id

4U4U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Lycorine bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAUACAG*UUGUAAUU

Length

15 nucleotides

Bulged bases

4U4U|1|2|A|506

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U4U|1|2|G|480
4U4U|1|2|A|481
4U4U|1|2|U|482
4U4U|1|2|A|483
4U4U|1|2|C|484
4U4U|1|2|A|485
4U4U|1|2|G|486
*
4U4U|1|2|U|501
4U4U|1|2|U|502
4U4U|1|2|G|503
4U4U|1|2|U|504
4U4U|1|2|A|505
4U4U|1|2|A|506
4U4U|1|2|U|507
4U4U|1|2|U|508

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain E0

40S ribosomal protein S30-A

Chain S9

40S ribosomal protein S9-A