IL_4U4U_511

3D structure

PDB id

4U4U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Lycorine bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGGC*GAUUUCCA

Length

12 nucleotides

Bulged bases

4U4U|1|6|G|651

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U4U|1|6|U|650
4U4U|1|6|G|651
4U4U|1|6|G|652
4U4U|1|6|C|653
*
4U4U|1|6|G|677
4U4U|1|6|A|678
4U4U|1|6|U|679
4U4U|1|6|U|680
4U4U|1|6|U|681
4U4U|1|6|C|682
4U4U|1|6|C|683
4U4U|1|6|A|684

Current chains

Chain 6

18S ribosomal RNA

Nearby chains

Chain s9

40S ribosomal protein S9-A