IL_4U4Z_464

3D structure

PDB id

4U4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Phyllanthoside bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GACGGUGGCC*GGAAUCCGCUAAGGAGUGUGUAACAACUCAC

Length

41 nucleotides

Bulged bases

4U4Z|1|1|G|1236

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U4Z|1|1|G|1230
4U4Z|1|1|A|1231
4U4Z|1|1|C|1232
4U4Z|1|1|G|1233
4U4Z|1|1|G|1234
4U4Z|1|1|U|1235
4U4Z|1|1|G|1236
4U4Z|1|1|G|1237
4U4Z|1|1|C|1238
4U4Z|1|1|C|1239
*
4U4Z|1|1|G|1249
4U4Z|1|1|G|1250
4U4Z|1|1|A|1251
4U4Z|1|1|A|1252
4U4Z|1|1|U|1253
4U4Z|1|1|C|1254
4U4Z|1|1|C|1255
4U4Z|1|1|G|1256
4U4Z|1|1|C|1257
4U4Z|1|1|U|1258
4U4Z|1|1|A|1259
4U4Z|1|1|A|1260
4U4Z|1|1|G|1261
4U4Z|1|1|G|1262
4U4Z|1|1|A|1263
4U4Z|1|1|G|1264
4U4Z|1|1|U|1265
4U4Z|1|1|G|1266
4U4Z|1|1|U|1267
4U4Z|1|1|G|1268
4U4Z|1|1|U|1269
4U4Z|1|1|A|1270
4U4Z|1|1|A|1271
4U4Z|1|1|C|1272
4U4Z|1|1|A|1273
4U4Z|1|1|A|1274
4U4Z|1|1|C|1275
4U4Z|1|1|U|1276
4U4Z|1|1|C|1277
4U4Z|1|1|A|1278
4U4Z|1|1|C|1279

Current chains

Chain 1

25S ribosomal RNA

Nearby chains