IL_4U50_257
3D structure
- PDB id
- 4U50 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Verrucarin bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CCG*CUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U50_257 not in the Motif Atlas
- Homologous match to IL_5TBW_027
- Geometric discrepancy: 0.0717
- The information below is about IL_5TBW_027
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
4U50|1|5|C|803
4U50|1|5|C|804
4U50|1|5|G|805
*
4U50|1|5|C|938
4U50|1|5|U|939
4U50|1|5|G|940
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain l4
- 60S ribosomal protein L4-A
- Chain n8
- 60S ribosomal protein L28
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