IL_4U50_381
3D structure
- PDB id
- 4U50 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Verrucarin bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CC*GUG
- Length
- 5 nucleotides
- Bulged bases
- 4U50|1|6|U|280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U50_381 not in the Motif Atlas
- Homologous match to IL_4V88_401
- Geometric discrepancy: 0.1291
- The information below is about IL_4V88_401
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
4U50|1|6|C|275
4U50|1|6|C|276
*
4U50|1|6|G|279
4U50|1|6|U|280
4U50|1|6|G|281
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
- Chain n4
- 60S ribosomal protein L24-A
- Chain s6
- 40S ribosomal protein S6-A
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