IL_4U50_467
3D structure
- PDB id
- 4U50 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Verrucarin bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UCGG*CGA
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U50_467 not in the Motif Atlas
- Geometric match to IL_4V87_185
- Geometric discrepancy: 0.3965
- The information below is about IL_4V87_185
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09990.3
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
4U50|1|1|U|1950
4U50|1|1|C|1951
4U50|1|1|G|1952
4U50|1|1|G|1953
*
4U50|1|1|C|2094
4U50|1|1|G|2095
4U50|1|1|A|2096
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain M9
- 60S ribosomal protein L19-A
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