IL_4U50_510

3D structure

PDB id

4U50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Verrucarin bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

UGGC*GAUUUCCA

Length

12 nucleotides

Bulged bases

4U50|1|6|G|651

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U50|1|6|U|650
4U50|1|6|G|651
4U50|1|6|G|652
4U50|1|6|C|653
*
4U50|1|6|G|677
4U50|1|6|A|678
4U50|1|6|U|679
4U50|1|6|U|680
4U50|1|6|U|681
4U50|1|6|C|682
4U50|1|6|C|683
4U50|1|6|A|684

Current chains

Chain 6

18S ribosomal RNA

Nearby chains

Chain s9

40S ribosomal protein S9-A