IL_4U51_361

3D structure

PDB id

4U51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Narciclasine bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GUAGAG*CGAUC

Length

11 nucleotides

Bulged bases

4U51|1|5|U|3341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U51|1|5|G|3340
4U51|1|5|U|3341
4U51|1|5|A|3342
4U51|1|5|G|3343
4U51|1|5|A|3344
4U51|1|5|G|3345
*
4U51|1|5|C|3360
4U51|1|5|G|3361
4U51|1|5|A|3362
4U51|1|5|U|3363
4U51|1|5|C|3364

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain m9

60S ribosomal protein L19-A

Chain n2

60S ribosomal protein L22-A

Chain n4

60S ribosomal protein L24-A

Chain s8

40S ribosomal protein S8-A