IL_4U51_470

3D structure

PDB id

4U51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Narciclasine bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CACACAAUA*UUUUGCGUG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U51|1|1|C|3162
4U51|1|1|A|3163
4U51|1|1|C|3164
4U51|1|1|A|3165
4U51|1|1|C|3166
4U51|1|1|A|3167
4U51|1|1|A|3168
4U51|1|1|U|3169
4U51|1|1|A|3170
*
4U51|1|1|U|3280
4U51|1|1|U|3281
4U51|1|1|U|3282
4U51|1|1|U|3283
4U51|1|1|G|3284
4U51|1|1|C|3285
4U51|1|1|G|3286
4U51|1|1|U|3287
4U51|1|1|G|3288

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain O3

60S ribosomal protein L33-A