IL_4U52_464
3D structure
- PDB id
- 4U52 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Nagilactone C bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GAAUGUAGC*GUAUUAUAGC
- Length
- 19 nucleotides
- Bulged bases
- 4U52|1|1|U|534, 4U52|1|1|U|558
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4U52|1|1|G|531
4U52|1|1|A|532
4U52|1|1|A|533
4U52|1|1|U|534
4U52|1|1|G|535
4U52|1|1|U|536
4U52|1|1|A|537
4U52|1|1|G|538
4U52|1|1|C|539
*
4U52|1|1|G|552
4U52|1|1|U|553
4U52|1|1|A|554
4U52|1|1|U|555
4U52|1|1|U|556
4U52|1|1|A|557
4U52|1|1|U|558
4U52|1|1|A|559
4U52|1|1|G|560
4U52|1|1|C|561
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain M4
- 60S ribosomal protein L14-A
- Chain N0
- 60S ribosomal protein L20-A
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