IL_4U52_473

3D structure

PDB id

4U52 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Nagilactone C bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAUGGCC*GUGCUGG

Length

14 nucleotides

Bulged bases

4U52|1|2|U|280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U52|1|2|C|270
4U52|1|2|A|271
4U52|1|2|U|272
4U52|1|2|G|273
4U52|1|2|G|274
4U52|1|2|C|275
4U52|1|2|C|276
*
4U52|1|2|G|279
4U52|1|2|U|280
4U52|1|2|G|281
4U52|1|2|C|282
4U52|1|2|U|283
4U52|1|2|G|284
4U52|1|2|G|285

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain S6

40S ribosomal protein S6-A