IL_4U53_055

3D structure

PDB id

4U53 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGGUGGC*GAAUCCG

Length

14 nucleotides

Bulged bases

4U53|1|1|G|1236

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U53|1|1|C|1232
4U53|1|1|G|1233
4U53|1|1|G|1234
4U53|1|1|U|1235
4U53|1|1|G|1236
4U53|1|1|G|1237
4U53|1|1|C|1238
*
4U53|1|1|G|1250
4U53|1|1|A|1251
4U53|1|1|A|1252
4U53|1|1|U|1253
4U53|1|1|C|1254
4U53|1|1|C|1255
4U53|1|1|G|1256

Current chains

Chain 1

25S ribosomal RNA

Nearby chains