IL_4U53_066
3D structure
- PDB id
- 4U53 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GGAUUCUUC*GGAAUAGUUUUC
- Length
- 21 nucleotides
- Bulged bases
- 4U53|1|1|U|1629, 4U53|1|1|U|1821
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4U53|1|1|G|1623
4U53|1|1|G|1624
4U53|1|1|A|1625
4U53|1|1|U|1626
4U53|1|1|U|1627
4U53|1|1|C|1628
4U53|1|1|U|1629
4U53|1|1|U|1630
4U53|1|1|C|1631
*
4U53|1|1|G|1811
4U53|1|1|G|1812
4U53|1|1|A|1813
4U53|1|1|A|1814
4U53|1|1|U|1815
4U53|1|1|A|1816
4U53|1|1|G|1817
4U53|1|1|U|1818
4U53|1|1|U|1819
4U53|1|1|U|1820
4U53|1|1|U|1821
4U53|1|1|C|1822
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain N7
- 60S ribosomal protein L27-A
- Chain O4
- 60S ribosomal protein L34-A
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