IL_4U55_428
3D structure
- PDB id
- 4U55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Cryptopleurine bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GUGG*CCC
- Length
- 7 nucleotides
- Bulged bases
- 4U55|1|6|U|1269
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U55_428 not in the Motif Atlas
- Geometric match to IL_4V9F_023
- Geometric discrepancy: 0.2548
- The information below is about IL_4V9F_023
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
4U55|1|6|G|1268
4U55|1|6|U|1269
4U55|1|6|G|1270
4U55|1|6|G|1271
*
4U55|1|6|C|1439
4U55|1|6|C|1440
4U55|1|6|C|1441
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
- Chain c0
- 40S ribosomal protein S10-A
- Chain d9
- 40S ribosomal protein S29-A
- Chain e1
- Ubiquitin-40S ribosomal protein S31
- Chain s3
- 40S ribosomal protein S3
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