IL_4U67_032
3D structure
- PDB id
- 4U67 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.65 Å
Loop
- Sequence
- UCCCUAAAUG*CUA
- Length
- 13 nucleotides
- Bulged bases
- 4U67|1|X|U|1019, 4U67|1|X|U|1023
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U67_032 not in the Motif Atlas
- Geometric match to IL_5TBW_110
- Geometric discrepancy: 0.2415
- The information below is about IL_5TBW_110
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
4U67|1|X|U|1015
4U67|1|X|C|1016
4U67|1|X|C|1017
4U67|1|X|C|1018
4U67|1|X|U|1019
4U67|1|X|A|1020
4U67|1|X|A|1021
4U67|1|X|A|1022
4U67|1|X|U|1023
4U67|1|X|G|1024
*
4U67|1|X|C|1160
4U67|1|X|U|1161
4U67|1|X|A|1162
Current chains
- Chain X
- 23s RNA
Nearby chains
- Chain G
- 50S ribosomal protein L13
- Chain N
- 50S ribosomal protein L20
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