IL_4U67_038

3D structure

PDB id

4U67 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22

Experimental method

X-RAY DIFFRACTION

Resolution

3.65 Å

Loop

Sequence

GAGUG*CUC

Length

8 nucleotides

Bulged bases

4U67|1|X|A|1099

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4U67_038 not in the Motif Atlas

Homologous match to IL_7RQB_044

Geometric discrepancy: 0.3739

The information below is about IL_7RQB_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U67|1|X|G|1098
4U67|1|X|A|1099
4U67|1|X|G|1100
4U67|1|X|U|1101
4U67|1|X|G|1102
*
4U67|1|X|C|1111
4U67|1|X|U|1112
4U67|1|X|C|1113

Current chains

Chain X

23s RNA

Nearby chains