IL_4U67_049

3D structure

PDB id

4U67 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22

Experimental method

X-RAY DIFFRACTION

Resolution

3.65 Å

Loop

Sequence

UGAUG*CUAAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4U67_049 not in the Motif Atlas

Homologous match to IL_7A0S_051

Geometric discrepancy: 0.2127

The information below is about IL_7A0S_051

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_08938.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

25

Unit IDs

4U67|1|X|U|1431
4U67|1|X|G|1432
4U67|1|X|A|1433
4U67|1|X|U|1434
4U67|1|X|G|1435
*
4U67|1|X|C|1593
4U67|1|X|U|1594
4U67|1|X|A|1595
4U67|1|X|A|1596
4U67|1|X|A|1597

Current chains

Chain X

23s RNA

Nearby chains