IL_4U67_100
3D structure
- PDB id
- 4U67 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.65 Å
Loop
- Sequence
- UCG*CCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U67_100 not in the Motif Atlas
- Homologous match to IL_7A0S_107
- Geometric discrepancy: 0.1244
- The information below is about IL_7A0S_107
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_71625.4
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 95
Unit IDs
4U67|1|Y|U|82
4U67|1|Y|C|83
4U67|1|Y|G|84
*
4U67|1|Y|C|97
4U67|1|Y|C|98
4U67|1|Y|G|99
Current chains
- Chain Y
- 5s RNA
Nearby chains
- Chain J
- 50S ribosomal protein L16
- Chain S
- 50S ribosomal protein L25
- Chain W
- 50S ribosomal protein L30
- Chain X
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: