IL_4U6F_296

3D structure

PDB id

4U6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of T-2 toxin bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGAUU*AGUUUUC

Length

12 nucleotides

Bulged bases

4U6F|1|5|U|1820, 4U6F|1|5|U|1821

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U6F|1|5|G|1623
4U6F|1|5|G|1624
4U6F|1|5|A|1625
4U6F|1|5|U|1626
4U6F|1|5|U|1627
*
4U6F|1|5|A|1816
4U6F|1|5|G|1817
4U6F|1|5|U|1818
4U6F|1|5|U|1819
4U6F|1|5|U|1820
4U6F|1|5|U|1821
4U6F|1|5|C|1822

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain n7

60S ribosomal protein L27-A

Chain o4

60S ribosomal protein L34-A

Chain o8

60S ribosomal protein L38