IL_4U6F_473
3D structure
- PDB id
- 4U6F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of T-2 toxin bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUG*CCC
- Length
- 7 nucleotides
- Bulged bases
- 4U6F|1|2|U|1052
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U6F_473 not in the Motif Atlas
- Geometric match to IL_8VTW_033
- Geometric discrepancy: 0.2656
- The information below is about IL_8VTW_033
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
4U6F|1|2|G|1050
4U6F|1|2|G|1051
4U6F|1|2|U|1052
4U6F|1|2|G|1053
*
4U6F|1|2|C|1066
4U6F|1|2|C|1067
4U6F|1|2|C|1068
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain C7
- 40S ribosomal protein S17-A
- Chain D7
- 40S ribosomal protein S27-A
- Chain S0
- 40S ribosomal protein S0-A
- Chain S1
- 40S ribosomal protein S1-A
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