IL_4UE5_015

3D structure

PDB id

4UE5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural basis for targeting and elongation arrest of Bacillus signal recognition particle

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GAG*CC

Length

5 nucleotides

Bulged bases

4UE5|1|A|A|176

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4UE5_015 not in the Motif Atlas

Geometric match to IL_7RQB_059

Geometric discrepancy: 0.2895

The information below is about IL_7RQB_059

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_37497.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

118

Unit IDs

4UE5|1|A|G|175
4UE5|1|A|A|176
4UE5|1|A|G|177
*
4UE5|1|A|C|220
4UE5|1|A|C|221

Current chains

Chain A

7S RNA

Nearby chains

Chain C

SIGNAL RECOGNITION PARTICLE SUBUNIT SRP68