IL_4V4G_040

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

UUAGUUGCCAGCG*CGGGCACUCUAA

Length

25 nucleotides

Bulged bases

4V4G|1|AA|U|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|AA|U|1121
4V4G|1|AA|U|1122
4V4G|1|AA|A|1123
4V4G|1|AA|G|1124
4V4G|1|AA|U|1125
4V4G|1|AA|U|1126
4V4G|1|AA|G|1127
4V4G|1|AA|C|1128
4V4G|1|AA|C|1129
4V4G|1|AA|A|1130
4V4G|1|AA|G|1131
4V4G|1|AA|C|1132
4V4G|1|AA|G|1133
*
4V4G|1|AA|C|1141
4V4G|1|AA|G|1142
4V4G|1|AA|G|1143
4V4G|1|AA|G|1144
4V4G|1|AA|C|1145
4V4G|1|AA|A|1146
4V4G|1|AA|C|1147
4V4G|1|AA|U|1148
4V4G|1|AA|C|1149
4V4G|1|AA|U|1150
4V4G|1|AA|A|1151
4V4G|1|AA|A|1152

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AI

30S ribosomal protein S9

Chain AJ

30S ribosomal protein S10