IL_4V4G_064

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

AGGGAACUG*CUCAGUACCU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|BB|A|163
4V4G|1|BB|G|164
4V4G|1|BB|G|165
4V4G|1|BB|G|166
4V4G|1|BB|A|167
4V4G|1|BB|A|168
4V4G|1|BB|C|169
4V4G|1|BB|U|170
4V4G|1|BB|G|171
*
4V4G|1|BB|C|178
4V4G|1|BB|U|179
4V4G|1|BB|C|180
4V4G|1|BB|A|181
4V4G|1|BB|G|182
4V4G|1|BB|U|183
4V4G|1|BB|A|184
4V4G|1|BB|C|185
4V4G|1|BB|C|186
4V4G|1|BB|U|187

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain B1

50S ribosomal protein L31

Chain B4

50S ribosomal protein L34

Chain BF

50S ribosomal protein L4

Chain BM

50S ribosomal protein L15