IL_4V4G_065

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

CCGUUAGUAG*CGAACCCGG

Length

19 nucleotides

Bulged bases

4V4G|1|BB|G|219, 4V4G|1|BB|C|235

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|BB|C|213
4V4G|1|BB|C|214
4V4G|1|BB|G|215
4V4G|1|BB|U|216
4V4G|1|BB|U|217
4V4G|1|BB|A|218
4V4G|1|BB|G|219
4V4G|1|BB|U|220
4V4G|1|BB|A|221
4V4G|1|BB|G|222
*
4V4G|1|BB|C|230
4V4G|1|BB|G|231
4V4G|1|BB|A|232
4V4G|1|BB|A|233
4V4G|1|BB|C|234
4V4G|1|BB|C|235
4V4G|1|BB|C|236
4V4G|1|BB|G|237
4V4G|1|BB|G|238

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain B5

50S ribosomal protein L35

Chain BM

50S ribosomal protein L15