IL_4V4G_071

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

GAAACC*GGAGAUAGC

Length

15 nucleotides

Bulged bases

4V4G|1|BB|A|689, 4V4G|1|BB|G|814, 4V4G|1|BB|G|818

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|BB|G|687
4V4G|1|BB|A|688
4V4G|1|BB|A|689
4V4G|1|BB|A|690
4V4G|1|BB|C|691
4V4G|1|BB|C|692
*
4V4G|1|BB|G|811
4V4G|1|BB|G|812
4V4G|1|BB|A|813
4V4G|1|BB|G|814
4V4G|1|BB|A|815
4V4G|1|BB|U|816
4V4G|1|BB|A|817
4V4G|1|BB|G|818
4V4G|1|BB|C|819

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain B4

50S ribosomal protein L34

Chain BF

50S ribosomal protein L4

Chain BM

50S ribosomal protein L15