IL_4V4G_077

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

GAGCACU*AAACUCC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|BB|G|875
4V4G|1|BB|A|876
4V4G|1|BB|G|877
4V4G|1|BB|C|878
4V4G|1|BB|A|879
4V4G|1|BB|C|880
4V4G|1|BB|U|881
*
4V4G|1|BB|A|921
4V4G|1|BB|A|922
4V4G|1|BB|A|923
4V4G|1|BB|C|924
4V4G|1|BB|U|925
4V4G|1|BB|C|926
4V4G|1|BB|C|927

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain BA

5S ribosomal RNA; 5S rRNA

Chain BN

50S ribosomal protein L16

Chain BW

general stress protein Ctc

Chain BX

50S ribosomal protein L27